Achituv, Y., and Dubinsky, Z. 1990. Evolution and zoogeography of coral reefs. Dubinsky, Z., ed. Ecosystems of the world: Coral reefs, New York, NY: Elsevier.

Ackerman, A.S., Toon, O.B., Stevens, D.E., Heymsfield, A.J., Ramanathan, V. and Welton, E.J. 2000. Reduction of tropical cloudiness by soot. Science 288: 1042-1047.

Adjeroud, M., Augustin, D., Galzin, R. and Salvat, B. 2002. Natural disturbances and interannual variability of coral reef communities on the outer slope of Tiahura (Moorea, French Polynesia): 1991 to 1997. Marine Ecology Progress Series 237: 121-131.

Adjeroud, M., Chancerelle, Y., Schrimm, M., Perez, T., Lecchini, D., Galzin, R. and Salvat, B. 2005. Detecting the effects of natural disturbances on coral assemblages in French Polynesia: A decade survey at multiple scales. Aquatic Living Resources 18: 111-123.

Alvarez, L.W., Alvarez, W., Asaro, F. and Michel, H.V. 1980. Extraterrestrial cause for the Cretaceous-Tertiary extinction. Science 208: 1095-1108.

Alvarez, W., Alvarez, L.W., Asaro, F. and Michel, H.V. 1984. The end of the Cretaceous: Sharp boundary or gradual transition? Science 223: 1183-1186.

Appenzeller, C., Stocker, T.F. and Anklin, M. 1998. North Atlantic Oscillation dynamics recorded in Greenland ice cores. Science 282: 446-449.

Apprill, A.M. and Gates, R.D. 2007. Recognizing diversity in coral symbiotic dinoflagellate communities. Molecular Ecology 16: 1127-1134.

Aronson, R.B. and Precht, W.F. 1997. Stasis, biological disturbance, and community structure of a Holocene coral reef. Paleobiology 23: 326-346.

Ayre, D.J. and Hughes, T.P. 2004. Climate change, genotypic diversity and gene flow in reef-building corals. Ecology Letters 7: 273-278.

Baird, A.H., Cumbo, V.R., Leggat, W. and Rodriguez-Lanetty, M. 2007. Fidelity and flexibility in coral symbioses. Marine Ecology Progress Series 347: 307-309.

Baker, A.C. 2001. Reef corals bleach to survive change. Nature 411: 765-766.

Baker, A.C., Starger, C.J., McClanahan, T.R. and Glynn, P.W. 2002. Symbiont communities in reef corals following the 1997-98 El Niņo - will recovering reefs be more resistant to a subsequent bleaching event? Proceedings of the International Society of Reef Studies (Abstract Volume 10: European Meeting, Cambridge, UK, September).

Baker, A.C., Starger, C.J., McClanahan, T.R. and Glynn, P.W. 2004. Corals' adaptive response to climate change. Nature 430: 741.

Bena, C. and van Woesik, R. 2004. The impact of two bleaching events on the survival of small coral colonies (Okinawa, Japan). Bulletin of Marine Science 75: 115-125.

Benzie, J.A.H. 1999. Genetic structure of coral reef organisms: Ghosts of dispersal past. American Zoologist 39: 131-145.

Berkelmans, R. and van Oppen, M.J.H. 2006. The role of zooxanthellae in the thermal tolerance of corals: a "nugget of hope" for coral reefs in an era of climate change. Proceedings of the Royal Society B 273: 2305-2312.

Berner, R.A. and Kothavala, Z. 2001. GEOCARB III: A revised model of atmospheric CO2 over phanerozoic time. American Journal of Science 301: 182-204.

Black, N.A., Voellmy, R. and Szmant, A.M. 1995. Heat shock protein induction in Montastrea faveoluta and Aiptasia pallida exposed to elevated temperature. Biological Bulletin 188: 234-240.

Brown, B.E. 1997. Coral bleaching: Causes and consequences. Coral Reefs 16: S129-S138.

Brown, B.E., Clarke, K.R. and Warwick, R.M. 2002. Serial patterns of biodiversity change in corals across shallow reef flats in Ko Phuket, Thailand, due to the effects of local (sedimentation) and regional (climatic) perturbations. Marine Biology 141: 24-29.

Brown, B.E., Dunne, R.P. and Chansang, H. 1996. Coral bleaching relative to elevated seawater temperature in the Andaman Sea (Indian Ocean) over the last 50 years. Coral Reefs 15: 151-152.

Brown, B.E., Dunne, R.P., Scoffin, T.P. and Le Tissier, M.D.A. 1994b. Solar damage in intertidal corals. Marine Ecology Progress Series 105: 219-230.

Brown, B.E., Le Tissier, M.D.A. and Bythell, J.C. 1995. Mechanisms of bleaching deduced from histological studies of reef corals sampled during a natural bleaching event. Coral Reefs 122: 655-653.

Brown, B.E., Le Tissier, M.D.A. and Dunne, R.P. 1994a . Tissue retraction in the scleractinian coral Coeloseris mayeri, its effect upon coral pigmentation, and preliminary implications for heat balance. Marine Ecology Progress Series 105: 209-218.

Buddemeier, R.W. 1992. Corals, climate and conservation. Proceedings of the Seventh International Coral Reef Symposium 1: 3-10.

Buddemeier, R.W. and Fautin, D.G. 1993. Coral bleaching as an adaptive mechanism. BioScience 43: 320-326.

Buddemeier, R.W., Baker, A.C., Fautin, D.G. and Jacobs, J.R. 2004. The adaptive hypothesis of bleaching. In Rosenberg, E. and Loya, Y. (Eds.) Coral Health and Disease, Springer, Berlin, Germany, p. 427-444.

Buddemeier, R.W. and Smith, S.V. 1988. Coral-reef growth in an era of rapidly rising sea-level - predictions and suggestions for long-term research. Coral Reefs 7: 51-56.

Buddemeier, R.W. and Smith, S.V. 1999. Coral adaptation and acclimatization: A most ingenious paradox. American Zoologist 39: 1-9.

Catala-Stucki, R. 1959. Fluorescence effects from corals irradiated with ultra-violet rays. Nature 183: 949.

Chadwick-Furman, N.E. 1996. Reef coral diversity and global change. 2: 559-568.

Chen, C.A., Wang, J.-T., Fang, L.-S. and Yang, Y.W. 2005. Fluctuating algal symbiont communities in Acropora palifera (Schleractinia: Acroporidae) from Taiwan. Marine Ecology Progress Series 295: 113-121.

Chen, D-X., Coughenour, M.B., Knapp, A.K. and Owensby, C.E. 1994. Mathematical simulation of C4 grass photosynthesis in ambient and elevated CO2. Ecological Modeling 73: 63-80.

Cole, J. 2003. Dishing the dirt on coral reefs. Nature 421: 705-706.

Coles, S.L. and Brown, B.E. 2003. Coral bleaching-capacity for acclimatization and adaptation. Advances in Marine Biology 46: 183-223.

Coles, S.L. and Fadlallah, Y.H. 1990. Reef coral survival and mortality at low temperatures in the Arabian Gulf: New species-specific lower temperature limits. Coral Reefs 9: 231-237.

Converse, R.H. and George, R.A. 1987. Elimination of mycoplasmalike organisms in Cabot highbush blueberry with high-carbon dioxide thermotherapy. Plant Disease Reporter 71: 36-38.

Cook, C.B., Logan, A., Ward, J., Luckhurst, B. and Berg, C.J., Jr. 1990. Elevated temperatures and bleaching on a high latitude coral reef: The 1988 Bermuda event. Coral Reefs 9: 45-49.

Cortes, J. and Jimenez, C. 2003. Corals and coral reefs of the Pacific of Costa Rica: history, research and status. In: Cortes, J. (Ed.) Latin American Coral Reefs. Elsevier, Amsterdam, The Netherlands, pp. 361-385.

Crossland, C.J. and Barnes, D.J. 1974. The role of metabolic nitrogen in coral calcification. Coral Reefs 28: 325-332.

Digerfeldt, G. and Hendry, M.D. 1987. An 8000 year Holocene sea-level record from Jamaica: Implications for interpretation of Caribbean reef and coastal history. Coral Reefs 5: 165-170.

Done, T.J. 1999. Coral community adaptability to environmental change at the scales of regions, reefs and reef zones. American Zoologist 39: 66-79.

Droller, J.H., Faucon, M., Maritorena, S. and Martin, P.M.V. 1994. A survey of environmental physico-chemical parameters during a minor coral mass bleaching event in Tahiti in 1993. Australian Journal of Marine and Freshwater Research 45: 1149-1156.

Duane, R.P. and Brown, B.E. 2001. The influence of solar radiation on bleaching of shallow water reef corals in the Andaman Sea, 1993-98. Coral Reefs 20: 201-210.

Dugam, S.S., Kakade, S.B. and Verma, R.K. 1997. Interannual and long-term variability in the North Atlantic Oscillation and Indian summer monsoon rainfall. Theoretical and Applied Climatology 58: 21-29.

Dykens, J.A. and Shick, J.M. 1984. Photobiology of the symbiotic sea anemone Anthopleura elegantissima: Defense against photo-dynamic effects, and seasonal photoacclimatization. Biological Bulletin 167: 693-697.

Edmunds, P.J. 1994. Evidence that reef-wide patterns of coral bleaching may be the result of the distribution of bleaching susceptible clones. Coral Reefs (Berlin) 121: 137-142.

Fagoonee, I., Wilson, H.B., Hassell, M.P. and Turner, J.R. 1999. The dynamics of zooxanthellae populations: A long-term study in the field. Science 283: 843-845.

Fang, L.-S., Huang, S.-P. and Lin, K.-L. 1997. High temperature induces the synthesis of heat-shock proteins and the elevation of intracellular calcium in the coral Acropora grandis. Coral Reefs 16: 127-131.

Fitt, W.K. and Warner, M.E. 1995. Bleaching patterns of four species of Caribbean reef corals. Biological Bulletin 189: 298-307.

Gates, R.D. and Edmunds, P.J. 1999. The physiological mechanisms of acclimatization in tropical reef corals. American Zoologist 39: 30-43.

Gates, R.D., Baghdasarian, G. and Muscatine, L. 1992. Temperature stress causes host cell detachment in symbiotic cnidarians: Implication for coral bleaching. Biological Bulletin 182: 324-332.

Gattuso, J.-P., Allemand, D. and Frankignoulle, M. 1999. Photosynthesis and calcification at cellular, organismal and community levels in coral reefs: A review on interactions and control by carbonate chemistry. American Zoologist 39: 160-183.

Gattuso, J.-P., Frankignoulle, M., Bourge, I., Romaine, S. and Buddemeier, R.W. 1998. Effect of calcium carbonate saturation of seawater on coral calcification. Global and Planetary Change 18: 37-46.

Gleason, D.F. and Wellington, G.M. 1993. Ultraviolet radiation and coral bleaching. Nature 365: 836-838.

Gleason, D.F. and Wellington, G.M. 1995. Variation in UVB sensitivity of planula larvae of the coral Agaricia agaricites along a depth gradient. Coral Reefs 123: 693-703.

Gleason, M.G. 1993. Effects of disturbance on coral communities: bleaching in Moorea, French Polynesia. Coral Reefs 12: 193-201.

Glynn, P.W. 1988. El Niņo-Southern Oscillation 1982-83: Nearshore population, community, and ecosystem responses. Annual Review of Ecology and Systematics 19: 309-345.

Glynn, P.W. 1991. Coral bleaching in the 1980s and possible connections with global warming trends. Ecology and Evolution 6: 175-179.

Glynn, P.W. 1996. Coral reef bleaching: facts, hypotheses and implications. Global Change Biology 2: 495-509.

Glynn, P.W. and D'Croz, L. 1990. Experimental evidence for high temperature stress as the cause of El-Niņo-coincident coral mortality. Coral Reefs 8: 181-190.

Glynn, P.W., Imai, R., Sakai, K., Nakano, Y. and Yamazato, K. 1992. Experimental responses of Okinawan (Ryukyu Islands, Japan) reef corals to high sea temperature and UV radiation. Proceedings of the 7th International Coral Reef Symposium 1: 27-37.

Glynn, P.W., Mate, J.L., Baker, A.C. and Calderon, M.O. 2001. Coral bleaching and mortality in Panama and Equador during the 1997-1998 El Niņo Southern Oscillation event: spatial/temporal patterns and comparisons with the 1982-1983 event. Bulletin of Marine Science 69: 79-109.

Greenstein, B.J., Curran, H.A. and Pandolfi, J.M. 1998a. Shifting ecological baselines and the demise of Acropora cervicornis in the western North Atlantic and Caribbean Province: A Pleistocene perspective. Coral Reefs 17: 249-261.

Greenstein, B.J., Harris, L.A. and Curran, H.A. 1998b. Comparison of recent coral life and death assemblages to Pleistocene reef communities: Implications for rapid faunal replacement on recent reefs. Carbonates & Evaporites 13: 23-31.

Grigg, R.W. and Epp, D. 1989. Critical depth for the survival of coral islands: Effects on the Hawaiian Archipelago. Science 243: 638-641.

Grodzinski, B., Madore, M., Shingles, R.A. and Woodrow, L. 1987. Partitioning and metabolism of photorespiratory intermediates. Biggins, J., ed. Progress in photosynthesis research. The Hague, The Netherlands: pp. 645-652.

Guzman, H.M. and Cortes, J. 1992. Cocos Island (Pacific of Costa Rica) coral reefs after the 1982-83 El Niņo disturbance. Revista de Biologia Tropical 40: 309-324.

Guzman, H.M. and Cortes, J. 2007. Reef recovery 20 years after the 1982-1983 El Niņo massive mortality. Coral Reefs 151: 401-411.

Hanson, K.R. and Peterson, R.B. 1986. Regulation of photorespiration in leaves: Evidence that the fraction of ribulose bisphosphate oxygenated is conserved and stoichiometry fluctuates. Archives for Biochemistry and Biophysics 246: 332-346.

Hayes, R.L. and King, C.M. 1995. Induction of 70-kD heat shock protein in scleractinian corals by elevated temperature: Significance for coral bleaching. Molecular Marine Biology and Biotechnology 4: 36-42.

Hill, D. Rugosa and Moore, R.D. 1956. (ed.) Treatise on invertebrate paleontology, Volume F, Coelenterata. Lawrence, KS: Geological Society of America/University of Kansas Press, pp. 233-323.

Hoegh-Guldberg, O. 1999. Climate change, coral bleaching and the future of the world's coral reefs. Marine and Freshwater Research 50: 839-866.

Hoegh-Guldberg, O. 2004. Coral reefs in a century of rapid environmental change. Symbiosis 37: 1-31.

Hoegh-Guldberg, O. and Fine, M. 2004. Low temperatures cause coral bleaching. Coral Reefs 23: 444.

Hoegh-Guldberg, O. and Salvat, B. 1995. Periodic mass-bleaching and elevated sea temperatures: bleaching of outer reef slope communities in Moorea, French Polynesia. Marine Ecology Progress Series 121: 181-190.

Hoegh-Guldberg, O. and Smith, G.J. 1989. The effect of sudden changes in temperature, light and salinity on the population density and export of zooxanthellae from the reef corals Stylophora pistillata Esper. and Seriatopora hystrix Dana. Journal of Experimental Marine Biology and Ecology 129: 279-303.

Hopley, D. and Kinsey, D.W. 1988. The effects of a rapid short-term sea-level rise on the Great Barrier Reef. Pearman, G.I., ed., Greenhouse: Planning for climate change. East Melbourne, Australia: CSIRO Publishin, pp. 189-201.

Hughes, T.P. 1994. Catastrophes, phase shifts, and large-scale degradation of a Caribbean coral reef. Science 265: 1547-1551.

Hurrell, J.W. 1995. Decadal trends in the North Atlantic Oscillation: Regional temperatures and precipitation. Science 269: 676-679.

Idso, K.E. and Idso, S.B. 1994. Plant responses to atmospheric CO2 enrichment in the face of environmental constraints: A review of the past 10 years' research. Agricultural and Forest Meteorology 69: 153-203.

Idso, S.B., Allen, S.G., Anderson, M.G. and Kimball, B.A. 1989. Atmospheric CO2 enrichment enhances survival of Azolla at high temperatures. Environmental and Experimental Botany 29: 337-341.

Idso, S.B., Kimball, B.A., Anderson, M.G. and Mauney, J.R. 1987. Effects of atmospheric CO2 enrichment on plant growth: The interactive role of air temperature. Agriculture, Ecosystems and Environment 20: 1-10.

Idso, S.B., Idso, K.E., Garcia, R.L., Kimball, B.A. and Hoober, J.K. 1995. Effects of atmospheric CO2 enrichment and foliar methanol application on net photosynthesis of sour orange tree (Citrus aurantium, Rutaceae) leaves. American Journal of Botany 82: 26-30.

IPCC, 2007. Climate Change 2007: Impacts, Adaptation and Vulnerability. Contribution of Working Group II to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change. M.L. Parry, O.F. Canziani, J.P. Palutikof, P.J. van der Linden and C.E. Hanson, (eds.). Cambridge University Press, Cambridge, UK, 976pp.

Jackson, J.B.C. 1992. Pleistocene perspectives on coral reef community structure. American Zoologist 32: 719-731.

Jimenez, C., Cortes, J., Leon, A. and Ruiz, E. 2001. Coral bleaching and mortality associated with the 1997-1998 El Niņo in an upwelling environment in the eastern Pacific (Gulf of Papagyo, Costa Rica). Bulletin of Marine Science 69: 151-169.

Jokiel, P.L. and Coles, S.L. 1990. Response of Hawaiian and other Indo-Pacific reef corals to elevated sea temperatures. Coral Reefs 8: 155-162.

Jones, A.M., Berkelmans, R., van Oppen, M.J.H., Mieog, J.C. and Sinclair, W. 2008. A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization. Proceedings of the Royal Society B 275: 1359-1365.

Jones, R.J. 1997. Changes in zooxanthellar densities and chlorophyll concentrations in corals during and after a bleaching event. Marine Ecology Progress Series 158: 51-59.

Jones, R.J., Hoegh-Guldberg, O., Larkum, A.W.D. and Schreiber, U. 1998. Temperature-induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae. Plant, Cell and Environment 21: 1219-1230.

Kinzie III, R.A. 1999. Sex, symbiosis and coral reef communities. American Zoologist 39: 80-91.

Kinzie III, R.A. and Buddemeier, R.W. 1996. Reefs happen. Global Change Biology 2: 479-494.

Kinzie III, R.A., Takayama, M., Santos, S.C. and Coffroth, M.A. 2001. The adaptive bleaching hypothesis: Experimental tests of critical assumptions. Biological Bulletin 200: 51-58.

Kobluk, D.R. and Lysenko, M.A. 1994. "Ring" bleaching in Southern Caribbean Agaricia agaricites during rapid water cooling. Bulletin of Marine Science 54: 142-150.

Kriedemann, P.E., Sward, R.J. and Downton, W.J.S. 1976. Vine response to carbon dioxide enrichment during heat therapy. Australian Journal of Plant Physiology 3: 605-618.

Kumaraguru, A.K., Jayakumar, K. and Ramakritinan, C.M. 2003. Coral bleaching 2002 in the Palk Bay, southeast coast of India. Current Science 85: 1787-1793.

Kushmaro, A., Rosenberg, E., Fine, M. and Loya, Y. 1997. Bleaching of the coral Oculina patagonica by Vibrio AK-1. Marine Ecology Progress Series 147: 159-165.

Kushmaro, A., Loya, Y., Fine, M. and Rosenberg, E. 1996. Bacterial infection and coral bleaching. Nature 380: 396.

Kushmaro, A., Rosenberg, E., Fine, M., Ben Haim, Y. and Loya, Y. 1998. Effect of temperature on bleaching of the coral Oculina patagonica by Vibrio AK-1. Marine Ecology Progress Series 171: 131-137.

Lesser, M.P. and Shick, J.M. 1989. Effects of irradiance and ultraviolet radiation on photoadaptation in the zooxanthellae of Aiptasia pallida: Primary production, photoinhibition, and enzymatic defense against oxygen toxicity. Coral Reefs 102: 243-255.

Lesser, M.P., Stochaj, W.R., Tapley, D.W. and Shick, J.M. 1990. Bleaching in coral reef anthozoans: Effects of irradiance, ultraviolet radiation, and temperature on the activities of protective enzymes against active oxygen. Coral Reefs 8: 225-232.

Lewis, C.L. and Coffroth, M.A. 2004. The acquisition of exogenous algal symbionts by an octocoral after bleaching. Science 304: 1490-1492.

Lien, Y.-T., Nakano, Y., Plathong, S., Fukami, H., Wang, J.-T. and Chen, C.A. 2007. Occurrence of the putatively heat-tolerant Symbiodinium phylotype D in high-latitudinal outlying coral communities. Coral Reefs 26: 35-44.

Linden, O. 1998. Coral mortality in the tropics: Massive causes and effects. Ambio 27: 588.

Lindzen, R.S., Chou, M.-D. and Hou, A.Y. 2001. Does the earth have an adaptive infrared iris? Bulletin of the American Meteorological Society 82: 417-432.

Little, A.F., van Oppen, M.J.H. and Willis, B.L. 2004. Flexibility in algal endosymbioses shapes growth in reef corals. Science 304: 1492-1494.

Long, S.P. 1991. Modification of the response of photosynthetic productivity to rising temperature by atmospheric CO2 concentrations: Has its importance been underestimated? Plant, Cell and Environment 14: 729-739.

Lough, J.M. and Barnes, D.J. 1997. Several centuries of variation in skeletal extension, density and calcification in massive Porites colonies from the Great Barrier Reef: A proxy for seawater temperature and a background of variability against which to identify unnatural change. Journal of Experimental Marine Biology and Ecology 211: 29-67.

Lyons, M.M., Aas, P., Pakulski, J.D., Van Waasbergen, L., Miller, R.V., Mitchell, D.L. and Jeffrey, W.H. 1998. DNA damage induced by ultraviolet radiation in coral-reef microbial communities. Coral Reefs 130: 537-543.

MacMunn, C.A. 1903. On the pigments of certain corals, with a note on the pigment of an asteroid. Gardiner, J.S., ed. The fauna and geography of the Maldive and Laccadive Archipelagoes. Cambridge, UK: Cambridge University Press. Vol. 1, pp. 184-190.

Marshall, P.A. and Baird, A.H. 2000. Bleaching of corals on the Great Barrier Reef: differential susceptibilities among taxa. Coral Reefs 19: 155-163.

Matta, J.L. and Trench, R.K. 1991. The enzymatic response of the symbiotic dinoflagellate Symbiodinium microadriaticum (Freudenthal) to growth under varied oxygen tensions. Symbiosis 11: 31-45.

Maynard, J.A., Anthony, K.R.N., Marshall, P.A. and Masiri, I. 2008. Major bleaching events can lead to increased thermal tolerance in corals. Coral Reefs (Berlin) 155: 173-182.

McCulloch, M., Fallon, S., Wyndham, T., Hendy, E., Lough, J. and Barnes, D. 2003. Coral record of increased sediment flux to the inner Great Barrier Reef since European settlement. Nature 421: 727-730.

Meehan, W.J. and Ostrander, G.K. 1997. Coral bleaching: A potential biomarker of environmental stress. Journal of Toxicology and Environmental Health 50: 529-552.

Middlebrook, R., Hoegh-Guldberg, O. and Leggat, W. 2008. The effect of thermal history on the susceptibility of reef-building corals to thermal stress. The Journal of Experimental Biology 211: 1050-1056.

Mieog, J.C., van Oppen, M.J.H., Cantin, N.E., Stam, W.T. and Olsen, J.L. 2007. Real-time PCR reveals a high incidence of Symbiodinium clade D at low levels in four scleractinian corals across the Great Barrier Reef: implications for symbiont shuffling. Coral Reefs 26: 449-457.

Montgomery, R.S. and Strong, A.E. 1994. Coral bleaching threatens oceans life. EOS 75: 145-147.

Mortensen, L.M. 1987. Review: CO2 enrichment in greenhouses. Crop responses. Scientia Horticulturae 33: 1-25.

Mumby, P.J. 1999. Bleaching and hurricane disturbances to populations of coral recruits in Belize. Marine Ecology Progress Series 190: 27-35.

Mumby, P.J., Chisholm, J.R.M., Edwards, A.J., Andrefouet, S. and Jaubert, J. 2001. Marine Ecology Progress Series 222: 209-216.

Muscatine, L., Grossman, D. and Doino, J. 1991. Release of symbiotic algae by tropical sea anemones and corals after cold shock. Marine Ecology Progress Series 77: 233-243.

Nair, S.V., Del Valle, H., Gross, P.S., Terwilliger, D.P. and Smith, L.C. 2005. Macroarray analysis of coelomocyte gene expression in response to LPS in the sea urchin. Identification of unexpected immune diversity in an invertebrate. Physiological Genomics 22: 33-47.

Nakamura, T. and van Woesik, R. 2001. Differential survival of corals during the 1998 bleaching event is partially explained by water-flow rates and passive diffusion. Marine Ecology Progress Series 212: 301-304.

Newell, N.D. 1971. An outline history of tropical organic reefs. Novitates 2465: 1-37.

Nowlis, J.S., Roberts, C.M., Smith, A.H. and Siirila, E. 1997. Human-enhanced impacts of a tropical storm on nearshore coral reefs. Ambio 26: 515-521.

Norris, J.R. 2001. Has northern Indian Ocean cloud cover changed due to increasing anthropogenic aerosol? Geophysical Research Letters 28: 3271-3274.

Pandolfi, J.M. 1999. Response of Pleistocene coral reefs to environmental change over long temporal scales. American Zoologist 39: 113-130.

Papina, M., Sakihama, Y., Bena, C., van Woesik, R. and Yamasaki, H. 2002. Separation of highly fluorescent proteins by SDS-PAGE in Acroporidae corals. Comp. Biochem. Phys. 131: 767-774.

Parmesan, C., Ryrholm, N., Stefanescu, C., Hill, J.K., Thomas, C.D., Descimon, H., Huntley, B., Kaila, L., Kullberg, J., Tammaru, T., Tennent, W.J., Thomas, J.A. and Warren, M. 1999. Poleward shifts in geographical ranges of butterfly species associated with regional warming. Nature 399: 579-583.

Pearce, F. 1999. Coral grief: The cause of reef health problems may be blowing in the wind. New Scientist 163 (2193): 22.

Petit, J.R., Jouzel, J., Raynaud, D., Barkov, N.I., Barnola, J.-M., Basile, I., Bender, M., Chappellaz, J., Davis, M., Delaygue, G., Delmotte, M., Kotlyakov, V.M., Legrand, M., Lipenkov, V.Y., Lorius, C., Pepin, L., Ritz, C., Saltzman, E. and Stievenard, M. 1999. Climate and atmospheric history of the past 420,000 years from the Vostok ice core, Antarctica. Nature 399: 429-436.

Pinker, R.T. and Laszlo, I. 1991. Modeling surface solar irradiance for satellite applications on a global scale. Journal of Applied Meteorology 31: 194-211.

Pittock, A.B. 1999. Coral reefs and environmental change: Adaptation to what? American Zoologist 39: 10-29.

Pochon, X., Garcia-Cuetos, L., Baker, A.C., Castella, E. and Pawlowski, J. 2007. One-year survey of a single Micronesian reef reveals extraordinarily rich diversity of Symbiodinium types in soritid foraminifera. Coral Reefs 26: 867-882.

Podesta, G.P. and Glynn, P.W. 1997. Sea surface temperature variability in Panama and Galapagos: Extreme temperatures causing coral bleaching. Journal of Geophysical Research 102: 15,749-15,759.

Podesta, G.P. and Glynn, P.W. 2001. The 1997-98 El Niņo event in Panama and Galapagos: an update of thermal stress indices relative to coral bleaching. Bulletin of Marine Science 69: 43-59.

Ralph, P.J., Gaddemann, R., Larkum, A.W.E. and Schreiber, U. 1999. In situ underwater measurements of photosynthetic activity of coral-reef dwelling endosymbionts. Marine Ecology Progress Series 180: 139-147.

Reshef, L., Koren, O., Loya, Y., Zilber-Rosenberg, I. and Rosenberg, E. 2006. The coral probiotic hypothesis. Environmental Microbiology 8: 2068-2073.

Richardson, L.L., Porter, J.W. and Barber, R.T. 1999. Status of the health of coral reefs: An update. U.S. Global Change Research Program Seminar Series, http://www.usgcrp.gov.

Riegl, B. 1999. Corals in a non-reef setting in the southern Arabian Gulf (Dubai, UAE): fauna and community structure in response to recurring mass mortality. Coral Reefs 18: 63-73.

Riegl, B. 2002. Effects of the 1996 and 1998 positive sea-surface temperature anomalies on corals, coral diseases and fish in the Arabian Gulf (Dubai, UAE). Coral Reefs (Berlin) 140: 29-40.

Riegl, B. 2003. Climate change and coral reefs: different effects in two high-latitude areas (Arabian Gulf, South Africa). Coral Reefs 22: 433-446.

Ritchie, K.B. and Smith, G.W. 1998. Type II white-band disease. Revista De Biologia Tropical 46: 199-203.

Roberts, D.A., Hofman, G.E. and Somero, G.N. 1997. Heat-shock protein expression in Mytilus californianus: Acclimatization (seasonal and tidal height comparisons) and acclimation effects. Biological Bulletin 192: 309-320.

Roberts, C.M. 1993. Coral reefs: Health, hazards and history. Trends in Ecology and Evolution 8: 425-427.

Roberts, D.A., Hofman, G.E. and Somero, G.N. 1997. Heat-shock protein expression in Mytilus californianus: Acclimatization (seasonal and tidal height comparisons) and acclimation effects. Biological Bulletin 192: 309-320.

Rowan, R. 2004. Thermal adaptation in reef coral symbionts. Nature 430: 742.

Rowan, R. and Knowlton, N. 1995. Intraspecific diversity and ecological zonation in coral-algal symbiosis. Proceeding of the National Academy of Sciences, U.S.A. 92: 2850-2853.

Rowan, R., Knowlton, N., Baker, A. and Jara, J. 1997. Landscape ecology of algal symbionts creates variation in episodes of coral bleaching. Nature 388: 265-269.

Rowan, R. and Powers, D. 1991. Molecular genetic identification of symbiotic dinoflagellates (zooxanthellae). Marine Ecology Progress Series 71: 65-73.

Salih, A., Larkum, A., Cox, G., Kuhl, M. And Hoegh-Guldberg, O. 2000. Fluorescent pigments in corals are photoprotective. Nature 408: 850-853.

Satheesh, S.K. and Ramanathan, V. 2000. Large differences in tropical aerosol forcing at the top of the atmosphere and Earth's surface. Nature 405: 60-63.

Saxby, T., Dennison, W.C. and Hoegh-Guldberg, O. 2003. Photosynthetic responses of the coral Montipora digitata to cold temperature stress. Marine Ecology Progress Series 248: 85-97.

Sharp, V.A., Brown, B.E. and Miller, D. 1997. Heat shock protein (hsp 70) expression in the tropical reef coral Goniopora djiboutiensis. Journal of Thermal Biology 22: 11-19.

Shick, J.M., Lesser, M.P. and Jokiel, P.L. 1996. Ultraviolet radiation and coral stress. Global Change Biology 2: 527-545.

Siebek, O. 1988. Experimental investigation of UV tolerance in hermatypic corals (Scleractinian). Marine Ecology Progress Series 43: 95-103.

Simkiss, K. 1964. Phosphates as crystal poisons of calcification. Biological Review 39: 487-505.

Skelly, D.K., Joseph, L.N., Possingham, H.P., Freidenburg, L.K., Farrugia, T.J., Kinnison, M.T. and Hendry, A.P. 2007. Evolutionary responses to climate change. Conservation Biology 21: 1353-1355.

Sud, Y.C., Walker, G.K. and Lau, K.-M. 1999. Mechanisms regulating sea-surface temperatures and deep convection in the tropics. Geophysical Research Letters 26: 1019-1022.

Thomas, C.D. and Lennon, J.J. 1999. Birds extend their ranges northwards. Nature 399: 213.

Toren, A., Landau, L., Kushmaro, A., Loya, Y. and Rosenberg, E. 1998. Effect of temperature on adhesion of Vibrio strain AK-1 to Oculina patagonica and on coral bleaching. Applied and Environmental Microbiology 64: 1379-1384.

Trench, R.K. 1979. The cell biology of plant-animal symbiosis. Annual Review of Plant Physiology 30: 485-531.

Umar, M.J., McCook, L.J. and Price, I.R. 1998. Effects of sediment deposition on the seaweed Sargassum on a fringing coral reef. Coral Reefs 17: 169-177.

Uppenbrink, J. 1999. The North Atlantic Oscillation. Science 283: 948-949.

Van Oppen, M.J.H. 2007. Perspective. Molecular Ecology 16: 1125-1126.

Van Oppen, M.J.H., Mahiny, A.J. and Done, T.J. 2005. Geographic distribution of zooxanthella types in three coral species on the Great Barrier Reef sampled after the 2002 bleaching event. Coral Reefs 24: 482-487.

van Woesik, R. 2000. Modelling processes that generate and maintain coral community diversity. Biodiversity and Conservation 9: 1219-1233.

Vareschi, E. and Fricke, H. 1986. Light responses of a scleractinian coral (Plerogyra sinuosa). Coral Reefs 90: 395-402.

Veizer, J., Ala, D., Azmy, K., Bruckschen, P., Buhl, D., Bruhn, F., Carden, G.A.F., Diener, A., Ebneth, S., Godderis, Y., Jasper, T., Korte, C., Pawellek, F., Podlaha, O. and Strauss, H. 1999. ⁸⁷Sr/⁸⁶Sr, δ¹³C and δ¹⁸O evolution of Phanerozoic seawater. Chemical Geology 161, 59-88.

Veron, J.E.N. 1995. Corals in space and time. Ithica, NY: Comstock/Cornell.

Walker, N.D., Roberts, H.H., Rouse, L.J., Jr. and Huh, O.K. 1982. Thermal history of reef-associated environments during a record cold-air outbreak event. Coral Reefs 1: 83-87.

Wesseling, I., Uychiaoco, A.J., Alino, P.M., Aurin, T. and Vermaat, J.E. 1999. Damage and recovery of four Philippine corals from short-term sediment burial. Marine Ecology Progress Series 176: 11-15.

White, B., Curran, H.A. and Wilson, M.A. 1998. Bahamian coral reefs yield evidence of a brief sea-level lowstand during the last interglacial. Carbonates & Evaporites 13: 10-22.

Wilkinson, C.R. 1996. Global change and coral reefs: Impacts on reefs, economies and human cultures. Global Change Biology 2: 547-558.

Williams, D. E., Hallock, P., Talge, H.K., Harney, J.N. and McRae, G. 1997. Responses of Amphistegina gibbosa populations in the Florida Keys (U.S.A.) to a multi-year stress event (1991-1996). Journal of Foraminiferal Research 27: 264-269.

Winter, A., Appeldoorn, R.S., Bruckner, A., Williams, E.H., Jr. and Goenaga, C. 1998. Sea surface temperatures and coral reef bleaching off La Parguera, Puerto Rico (northeast Caribbean Sea). Coral Reefs 17: 377-382.

Yonge, C.M. 1968. Living corals. Proceedings of the Royal Society of London B 169: 329-344.

Yu, K.-F., Zhao, J.-X., Liu, T.-S., Wei, G.-J., Wang, P.X. and Collerson, K.D. 2004. High-frequency winter cooling and reef coral mortality during the Holocene climatic optimum. Earth and Planetary Science Letters 224: 143-155.

Zapata, F.A. and Vargas-Angel, B. 2003. Corals and coral reefs of the Pacific coast of Columbia. In: Cortes, J. (Ed.) Latin American Coral Reefs. Elsevier, Amsterdam, The Netherlands, pp. 419-447.